=>> Building science/py-pnetcdf build started at Sun Dec 28 04:29:19 EST 2025 port directory: /usr/ports/science/py-pnetcdf package name: py311-pnetcdf-1.0.0_1 building for: FreeBSD 143amd64-deluxe-desktop-job-03 14.3-RELEASE-p2 FreeBSD 14.3-RELEASE-p2 amd64 maintained by: sunpoet@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1122 Dec 16 05:29 /usr/ports/science/py-pnetcdf/Makefile Ports top last git commit: 3dd9e2202282 Ports top unclean checkout: yes Port dir last git commit: 6ff9665a74c3 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.4 Host OSVERSION: 1403000 Jail OSVERSION: 1403000 Job Id: 03 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1403000 UNAME_v=FreeBSD 14.3-RELEASE-p2 UNAME_r=14.3-RELEASE-p2 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.4 MASTERMNT=/mnt/data/.m/143amd64-deluxe-desktop/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=screen GID=0 OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 UID=0 PWD=/mnt/data/.m/143amd64-deluxe-desktop/03/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=143amd64-deluxe-desktop SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/mnt/data/.m/143amd64-deluxe-desktop/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.4 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- sunpoet@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-pnetcdf/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -I/usr/local/include -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" " LIBS="-L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -I/usr/local/include -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=14.3 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/py311-pnetcdf" EXAMPLESDIR="share/examples/py311-pnetcdf" DATADIR="share/py311-pnetcdf" WWWDIR="www/py311-pnetcdf" ETCDIR="etc/py311-pnetcdf" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/py311-pnetcdf DOCSDIR=/usr/local/share/doc/py311-pnetcdf EXAMPLESDIR=/usr/local/share/examples/py311-pnetcdf WWWDIR=/usr/local/www/py311-pnetcdf ETCDIR=/usr/local/etc/py311-pnetcdf --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # Work around some weirdness when fetching golang modules GO_TAGS+=netcgo .if ${.CURDIR:M*/www/chromium*} MAKE_JOBS_NUMBER=24 .endif .if ${.CURDIR:M*/www/ungoogled-chromium*} MAKE_JOBS_NUMBER=24 .endif .if ${.CURDIR:M*/lang/rust*} MAKE_JOBS_NUMBER=10 .endif .if ${.CURDIR:M*/lang/gcc*} MAKE_JOBS_NUMBER=10 .endif .if ${.CURDIR:M*/www/iridium*} MAKE_JOBS_NUMBER=16 .endif .if ${.CURDIR:M*/devel/electron*} MAKE_JOBS_NUMBER=20 .endif .if ${.CURDIR:M*/databases/mongodb*} MAKE_JOBS_NUMBER=12 .endif .if ${.CURDIR:M*/devel/llvm*} MAKE_JOBS_NUMBER=16 .endif # Speed things up a bit MAKE_JOBS_NUMBER?=8 #### #### #MAKE_JOBS_NUMBER?=4 # Alows us to build ports non-interactivly DISABLE_LICENSES=yes LICENSES_ACCEPTED+= DCC # Enable SNDIO on anything that supports it #OPTIONS_SET+=PULSEAUDIO OPTIONS_SET+=SNDIO # Yes we have MS Windows x11-fonts_webfonts_SET+=EXTRAFONTS CLEARTYPE # Desktop Specific Options sysutils_gksu_UNSET+=NAUTILUS x11-wm_compiz-fusion_UNSET+=EMERALD accessibility_redshift_SET+=GUI VIDMODE # These ports default to other audio servers, audio_espeak_UNSET+=PORTAUDIO www_qt5-webengine_UNSET+=ALSA www_qt6-webengine_UNSET+=ALSA audio_rhvoice_UNSET+=AO comms_morse_UNSET+=OSS audio_harp_UNSET+=OSS # Somehow these options are being set and result in ports being rebuilt needlessly becuase they are actually turned off audio_alsa-plugins_SET+=FFMPEG JACK PULSEAUDIO SAMPLERATE SPEEX #### Misc Poudriere #### .include "/etc/make.conf.ports_env" ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pnetcdf-1.0.0_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.5.1.pkg [143amd64-deluxe-desktop-job-03] Installing pkg-2.5.1... [143amd64-deluxe-desktop-job-03] Extracting pkg-2.5.1: .......... done ===> py311-pnetcdf-1.0.0_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-pnetcdf-1.0.0_1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-pnetcdf-1.0.0_1 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-pnetcdf-1.0.0_1 for building => SHA256 Checksum OK for pnetcdf-1.0.0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Fetching all distfiles required by py311-pnetcdf-1.0.0_1 for building ===> Extracting for py311-pnetcdf-1.0.0_1 => SHA256 Checksum OK for pnetcdf-1.0.0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Patching for py311-pnetcdf-1.0.0_1 ===> Applying FreeBSD patches for py311-pnetcdf-1.0.0_1 from /usr/ports/science/py-pnetcdf/files =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pnetcdf-1.0.0_1 depends on package: py311-mpi4py-mpich>=3.1.4 - not found ===> Installing existing package /packages/All/py311-mpi4py-mpich-4.1.1.pkg [143amd64-deluxe-desktop-job-03] Installing py311-mpi4py-mpich-4.1.1... [143amd64-deluxe-desktop-job-03] `-- Installing gcc14-14.2.0_4... [143amd64-deluxe-desktop-job-03] | `-- Installing binutils-2.44,1... [143amd64-deluxe-desktop-job-03] | | `-- Installing indexinfo-0.3.1_1... [143amd64-deluxe-desktop-job-03] | | `-- Extracting indexinfo-0.3.1_1: . done [143amd64-deluxe-desktop-job-03] | | `-- Installing zstd-1.5.7_1... [143amd64-deluxe-desktop-job-03] | | `-- Extracting zstd-1.5.7_1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Extracting binutils-2.44,1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing gmp-6.3.0... [143amd64-deluxe-desktop-job-03] | `-- Extracting gmp-6.3.0: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing mpc-1.3.1_1... [143amd64-deluxe-desktop-job-03] | | `-- Installing mpfr-4.2.2,1... [143amd64-deluxe-desktop-job-03] | | `-- Extracting mpfr-4.2.2,1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Extracting mpc-1.3.1_1: ...... done [143amd64-deluxe-desktop-job-03] `-- Extracting gcc14-14.2.0_4: .......... done [143amd64-deluxe-desktop-job-03] `-- Installing mpich-4.3.2... [143amd64-deluxe-desktop-job-03] | `-- Installing hwloc2-2.12.1_1... [143amd64-deluxe-desktop-job-03] | | `-- Installing level-zero-1.26.1... [143amd64-deluxe-desktop-job-03] | | `-- Installing libfmt-12.1.0... [143amd64-deluxe-desktop-job-03] | | `-- Extracting libfmt-12.1.0: .......... done [143amd64-deluxe-desktop-job-03] | | `-- Installing spdlog-1.16.0_1... [143amd64-deluxe-desktop-job-03] | | `-- Extracting spdlog-1.16.0_1: .......... done [143amd64-deluxe-desktop-job-03] | | `-- Extracting level-zero-1.26.1: .......... done [143amd64-deluxe-desktop-job-03] | | `-- Installing libpciaccess-0.18.1_1... [143amd64-deluxe-desktop-job-03] | | `-- Installing hwdata-0.402,1... [143amd64-deluxe-desktop-job-03] | | `-- Extracting hwdata-0.402,1: ...... done [143amd64-deluxe-desktop-job-03] | | `-- Extracting libpciaccess-0.18.1_1: ..... done [143amd64-deluxe-desktop-job-03] | | `-- Installing libxml2-2.14.6... [143amd64-deluxe-desktop-job-03] | | `-- Installing readline-8.3.1... [143amd64-deluxe-desktop-job-03] | | `-- Extracting readline-8.3.1: .......... done [143amd64-deluxe-desktop-job-03] | | `-- Extracting libxml2-2.14.6: .......... done [143amd64-deluxe-desktop-job-03] | `-- Extracting hwloc2-2.12.1_1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing json-c-0.18... [143amd64-deluxe-desktop-job-03] | `-- Extracting json-c-0.18: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing libepoll-shim-0.0.20240608... [143amd64-deluxe-desktop-job-03] | `-- Extracting libepoll-shim-0.0.20240608: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing libfabric-1.15.1_4... [143amd64-deluxe-desktop-job-03] | `-- Extracting libfabric-1.15.1_4: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing perl5-5.42.0_1... [143amd64-deluxe-desktop-job-03] | `-- Extracting perl5-5.42.0_1: .......... done [143amd64-deluxe-desktop-job-03] `-- Extracting mpich-4.3.2: .......... done [143amd64-deluxe-desktop-job-03] `-- Installing python311-3.11.14... [143amd64-deluxe-desktop-job-03] | `-- Installing gettext-runtime-0.26... [143amd64-deluxe-desktop-job-03] | `-- Extracting gettext-runtime-0.26: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing libffi-3.5.1... [143amd64-deluxe-desktop-job-03] | `-- Extracting libffi-3.5.1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing mpdecimal-4.0.1... [143amd64-deluxe-desktop-job-03] | `-- Extracting mpdecimal-4.0.1: .......... done [143amd64-deluxe-desktop-job-03] `-- Extracting python311-3.11.14: .......... done [143amd64-deluxe-desktop-job-03] Extracting py311-mpi4py-mpich-4.1.1: .......... done ===== Message from gcc14-14.2.0_4: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc14 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from python311-3.11.14: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-pnetcdf-1.0.0_1 depends on package: py311-mpi4py-mpich>=3.1.4 - found ===> Returning to build of py311-pnetcdf-1.0.0_1 ===> py311-pnetcdf-1.0.0_1 depends on package: py311-numpy>=0,1 - not found ===> Installing existing package /packages/All/py311-numpy-1.26.4_11,1.pkg [143amd64-deluxe-desktop-job-03] Installing py311-numpy-1.26.4_11,1... [143amd64-deluxe-desktop-job-03] `-- Installing openblas-0.3.30,2... [143amd64-deluxe-desktop-job-03] `-- Extracting openblas-0.3.30,2: .......... done [143amd64-deluxe-desktop-job-03] `-- Installing suitesparse-umfpack-6.3.7... [143amd64-deluxe-desktop-job-03] | `-- Installing suitesparse-amd-3.3.4... [143amd64-deluxe-desktop-job-03] | | `-- Installing suitesparse-config-7.12.1... [143amd64-deluxe-desktop-job-03] | | `-- Extracting suitesparse-config-7.12.1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Extracting suitesparse-amd-3.3.4: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing suitesparse-camd-3.3.5... [143amd64-deluxe-desktop-job-03] | `-- Extracting suitesparse-camd-3.3.5: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing suitesparse-ccolamd-3.3.5... [143amd64-deluxe-desktop-job-03] | `-- Extracting suitesparse-ccolamd-3.3.5: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing suitesparse-cholmod-5.3.4... [143amd64-deluxe-desktop-job-03] | | `-- Installing suitesparse-colamd-3.3.5... [143amd64-deluxe-desktop-job-03] | | `-- Extracting suitesparse-colamd-3.3.5: .......... done [143amd64-deluxe-desktop-job-03] | `-- Extracting suitesparse-cholmod-5.3.4: .......... done [143amd64-deluxe-desktop-job-03] `-- Extracting suitesparse-umfpack-6.3.7: .......... done [143amd64-deluxe-desktop-job-03] Extracting py311-numpy-1.26.4_11,1: .......... done ===> py311-pnetcdf-1.0.0_1 depends on package: py311-numpy>=0,1 - found ===> Returning to build of py311-pnetcdf-1.0.0_1 ===> py311-pnetcdf-1.0.0_1 depends on package: py311-packaging>=23.1 - not found ===> Installing existing package /packages/All/py311-packaging-25.0.pkg [143amd64-deluxe-desktop-job-03] Installing py311-packaging-25.0... [143amd64-deluxe-desktop-job-03] Extracting py311-packaging-25.0: .......... done ===> py311-pnetcdf-1.0.0_1 depends on package: py311-packaging>=23.1 - found ===> Returning to build of py311-pnetcdf-1.0.0_1 ===> py311-pnetcdf-1.0.0_1 depends on package: py311-setuptools>=61 - not found ===> Installing existing package /packages/All/py311-setuptools-63.1.0_3.pkg [143amd64-deluxe-desktop-job-03] Installing py311-setuptools-63.1.0_3... [143amd64-deluxe-desktop-job-03] Extracting py311-setuptools-63.1.0_3: .......... done ===> py311-pnetcdf-1.0.0_1 depends on package: py311-setuptools>=61 - found ===> Returning to build of py311-pnetcdf-1.0.0_1 ===> py311-pnetcdf-1.0.0_1 depends on package: py311-wheel>=0 - not found ===> Installing existing package /packages/All/py311-wheel-0.45.1.pkg [143amd64-deluxe-desktop-job-03] Installing py311-wheel-0.45.1... [143amd64-deluxe-desktop-job-03] Extracting py311-wheel-0.45.1: .......... done ===> py311-pnetcdf-1.0.0_1 depends on package: py311-wheel>=0 - found ===> Returning to build of py311-pnetcdf-1.0.0_1 ===> py311-pnetcdf-1.0.0_1 depends on package: py311-cython>=0.29.37<3 - not found ===> Installing existing package /packages/All/py311-cython-0.29.37_2.pkg [143amd64-deluxe-desktop-job-03] Installing py311-cython-0.29.37_2... [143amd64-deluxe-desktop-job-03] Extracting py311-cython-0.29.37_2: .......... done ===> py311-pnetcdf-1.0.0_1 depends on package: py311-cython>=0.29.37<3 - found ===> Returning to build of py311-pnetcdf-1.0.0_1 ===> py311-pnetcdf-1.0.0_1 depends on file: /usr/local/bin/python3.11 - found ===> py311-pnetcdf-1.0.0_1 depends on package: py311-build>=0 - not found ===> Installing existing package /packages/All/py311-build-1.3.0.pkg [143amd64-deluxe-desktop-job-03] Installing py311-build-1.3.0... [143amd64-deluxe-desktop-job-03] `-- Installing py311-pyproject-hooks-1.2.0... [143amd64-deluxe-desktop-job-03] `-- Extracting py311-pyproject-hooks-1.2.0: .......... done [143amd64-deluxe-desktop-job-03] Extracting py311-build-1.3.0: .......... done ===> py311-pnetcdf-1.0.0_1 depends on package: py311-build>=0 - found ===> Returning to build of py311-pnetcdf-1.0.0_1 ===> py311-pnetcdf-1.0.0_1 depends on package: py311-installer>=0 - not found ===> Installing existing package /packages/All/py311-installer-0.7.0.pkg [143amd64-deluxe-desktop-job-03] Installing py311-installer-0.7.0... [143amd64-deluxe-desktop-job-03] Extracting py311-installer-0.7.0: .......... done ===> py311-pnetcdf-1.0.0_1 depends on package: py311-installer>=0 - found ===> Returning to build of py311-pnetcdf-1.0.0_1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pnetcdf-1.0.0_1 depends on shared library: libpnetcdf.so - not found ===> Installing existing package /packages/All/pnetcdf-mpich-1.14.1.pkg [143amd64-deluxe-desktop-job-03] Installing pnetcdf-mpich-1.14.1... [143amd64-deluxe-desktop-job-03] Extracting pnetcdf-mpich-1.14.1: .......... done ===> py311-pnetcdf-1.0.0_1 depends on shared library: libpnetcdf.so - found (/usr/local/lib/libpnetcdf.so) ===> Returning to build of py311-pnetcdf-1.0.0_1 ===> py311-pnetcdf-1.0.0_1 depends on shared library: libmpich.so - found (/usr/local/lib/libmpich.so) =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Configuring for py311-pnetcdf-1.0.0_1 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Building for py311-pnetcdf-1.0.0_1 * Getting build dependencies for wheel... /usr/local/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:104: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. warnings.warn(msg, _BetaConfiguration) pnc_ver: PnetCDF 1.14.1 pnc_libdir: /usr/local/lib pnc_includedir: /usr/local/include inc_dirs: ['/usr/local/include', '/usr/local/lib/python3.11/site-packages/mpi4py/include'] lib_dirs: ['/usr/local/lib'] libs: ['pnetcdf'] runtime_lib_dirs: ['/usr/local/lib'] running egg_info writing src/pnetcdf.egg-info/PKG-INFO writing dependency_links to src/pnetcdf.egg-info/dependency_links.txt writing requirements to src/pnetcdf.egg-info/requires.txt writing top-level names to src/pnetcdf.egg-info/top_level.txt reading manifest file 'src/pnetcdf.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'src/pnetcdf.egg-info/SOURCES.txt' * Building wheel... /usr/local/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:104: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. warnings.warn(msg, _BetaConfiguration) pnc_ver: PnetCDF 1.14.1 pnc_libdir: /usr/local/lib pnc_includedir: /usr/local/include inc_dirs: ['/usr/local/include', '/usr/local/lib/python3.11/site-packages/numpy/core/include', '/usr/local/lib/python3.11/site-packages/mpi4py/include'] lib_dirs: ['/usr/local/lib'] libs: ['pnetcdf'] runtime_lib_dirs: ['/usr/local/lib'] running bdist_wheel running build running build_py creating build creating build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311 creating build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf copying src/pnetcdf/__init__.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf running egg_info writing src/pnetcdf.egg-info/PKG-INFO writing dependency_links to src/pnetcdf.egg-info/dependency_links.txt writing requirements to src/pnetcdf.egg-info/requires.txt writing top-level names to src/pnetcdf.egg-info/top_level.txt reading manifest file 'src/pnetcdf.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'src/pnetcdf.egg-info/SOURCES.txt' copying src/pnetcdf/_Dimension.pxd -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf copying src/pnetcdf/_Dimension.pyx -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf copying src/pnetcdf/_File.pxd -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf copying src/pnetcdf/_File.pyx -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf copying src/pnetcdf/_Variable.pxd -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf copying src/pnetcdf/_Variable.pyx -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf copying src/pnetcdf/_utils.pxd -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf copying src/pnetcdf/_utils.pyx -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf running build_ext cythoning src/pnetcdf/_File.pyx to src/pnetcdf/_File.c cythoning src/pnetcdf/_Dimension.pyx to src/pnetcdf/_Dimension.c cythoning src/pnetcdf/_utils.pyx to src/pnetcdf/_utils.c cythoning src/pnetcdf/_Variable.pyx to src/pnetcdf/_Variable.c building 'pnetcdf._File' extension creating build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311 creating build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/src creating build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/src/pnetcdf cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -I/usr/local/include -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/local/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/lib/python3.11/site-packages/mpi4py/include -Iinclude -I/usr/local/include/python3.11 -c src/pnetcdf/_File.c -o build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/src/pnetcdf/_File.o -Wno-unreachable-code-fallthrough -Wno-unused-function -Wno-unreachable-code cc -shared -L/usr/local/lib -O2 -pipe -I/usr/local/include -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/src/pnetcdf/_File.o -L/usr/local/lib -L/usr/local/lib -Wl,-rpath=/usr/local/lib -lpnetcdf -o build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_File.cpython-311.so building 'pnetcdf._Dimension' extension cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -I/usr/local/include -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/local/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/lib/python3.11/site-packages/mpi4py/include -Iinclude -I/usr/local/include/python3.11 -c src/pnetcdf/_Dimension.c -o build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/src/pnetcdf/_Dimension.o -Wno-unreachable-code-fallthrough -Wno-unused-function -Wno-unreachable-code cc -shared -L/usr/local/lib -O2 -pipe -I/usr/local/include -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/src/pnetcdf/_Dimension.o -L/usr/local/lib -L/usr/local/lib -Wl,-rpath=/usr/local/lib -lpnetcdf -o build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_Dimension.cpython-311.so building 'pnetcdf._utils' extension cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -I/usr/local/include -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/local/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/lib/python3.11/site-packages/mpi4py/include -Iinclude -I/usr/local/include/python3.11 -c src/pnetcdf/_utils.c -o build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/src/pnetcdf/_utils.o -Wno-unreachable-code-fallthrough -Wno-unused-function -Wno-unreachable-code cc -shared -L/usr/local/lib -O2 -pipe -I/usr/local/include -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/src/pnetcdf/_utils.o -L/usr/local/lib -L/usr/local/lib -Wl,-rpath=/usr/local/lib -lpnetcdf -o build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_utils.cpython-311.so building 'pnetcdf._Variable' extension cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -I/usr/local/include -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/local/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/lib/python3.11/site-packages/mpi4py/include -Iinclude -I/usr/local/include/python3.11 -c src/pnetcdf/_Variable.c -o build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/src/pnetcdf/_Variable.o -Wno-unreachable-code-fallthrough -Wno-unused-function -Wno-unreachable-code cc -shared -L/usr/local/lib -O2 -pipe -I/usr/local/include -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/src/pnetcdf/_Variable.o -L/usr/local/lib -L/usr/local/lib -Wl,-rpath=/usr/local/lib -lpnetcdf -o build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_Variable.cpython-311.so installing to build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel running install running install_lib creating build/bdist.freebsd-14.3-RELEASE-p2-amd64 creating build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel creating build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_utils.cpython-311.so -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_utils.pyx -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_utils.pxd -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_Dimension.pxd -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_Dimension.pyx -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/__init__.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_File.cpython-311.so -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_File.pyx -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_File.pxd -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_Variable.pyx -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_Variable.pxd -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_Dimension.cpython-311.so -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/pnetcdf/_Variable.cpython-311.so -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf running install_egg_info Copying src/pnetcdf.egg-info to build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf-1.0.0-py3.11.egg-info running install_scripts creating build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/pnetcdf-1.0.0.dist-info/WHEEL creating '/wrkdirs/usr/ports/science/py-pnetcdf/work-py311/pnetcdf-1.0.0/dist/tmpeg7_hu96/pnetcdf-1.0.0-cp311-cp311-freebsd_14_3_release_p2_amd64.whl' and adding 'build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel' to it adding 'pnetcdf/_Dimension.cpython-311.so' adding 'pnetcdf/_Dimension.pxd' adding 'pnetcdf/_Dimension.pyx' adding 'pnetcdf/_File.cpython-311.so' adding 'pnetcdf/_File.pxd' adding 'pnetcdf/_File.pyx' adding 'pnetcdf/_Variable.cpython-311.so' adding 'pnetcdf/_Variable.pxd' adding 'pnetcdf/_Variable.pyx' adding 'pnetcdf/__init__.py' adding 'pnetcdf/_utils.cpython-311.so' adding 'pnetcdf/_utils.pxd' adding 'pnetcdf/_utils.pyx' adding 'pnetcdf-1.0.0.dist-info/METADATA' adding 'pnetcdf-1.0.0.dist-info/WHEEL' adding 'pnetcdf-1.0.0.dist-info/top_level.txt' adding 'pnetcdf-1.0.0.dist-info/RECORD' removing build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel Successfully built pnetcdf-1.0.0-cp311-cp311-freebsd_14_3_release_p2_amd64.whl =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pnetcdf-1.0.0_1 depends on package: py311-mpi4py-mpich>=3.1.4 - found ===> py311-pnetcdf-1.0.0_1 depends on package: py311-numpy>=0,1 - found ===> py311-pnetcdf-1.0.0_1 depends on package: py311-cython>=0.29.37<3 - found ===> py311-pnetcdf-1.0.0_1 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Staging for py311-pnetcdf-1.0.0_1 ===> Generating temporary packing list /usr/bin/find /wrkdirs/usr/ports/science/py-pnetcdf/work-py311/stage/usr/local/lib/python3.11/site-packages -name '*.so' -exec /usr/bin/strip {} + ===> Creating unique files: Move MAN files needing SUFFIX ===> Creating unique files: Move files needing SUFFIX ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2025-12-28T09:29:19+0000' 'PKG_NOTE_ports_top_git_hash=3dd9e2202282' 'PKG_NOTE_ports_top_checkout_unclean=yes' 'PKG_NOTE_port_git_hash=6ff9665a74c3' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.4' NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Building packages for py311-pnetcdf-1.0.0_1 ===> Building py311-pnetcdf-1.0.0_1 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for py311-pnetcdf-1.0.0_1 build of science/py-pnetcdf@py311 | py311-pnetcdf-1.0.0_1 ended at Sun Dec 28 04:29:57 EST 2025 build time: 00:00:39