=>> Building math/py-openTSNE build started at Mon Dec 29 12:52:36 EST 2025 port directory: /usr/ports/math/py-openTSNE package name: py311-openTSNE-1.0.2 building for: FreeBSD 143amd64-deluxe-desktop-job-03 14.3-RELEASE-p2 FreeBSD 14.3-RELEASE-p2 amd64 maintained by: yuri@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1024 Dec 14 2024 /usr/ports/math/py-openTSNE/Makefile Ports top last git commit: 3dd9e2202282 Ports top unclean checkout: yes Port dir last git commit: dae8e4a0fc33 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.4 Host OSVERSION: 1403000 Jail OSVERSION: 1403000 Job Id: 03 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1403000 UNAME_v=FreeBSD 14.3-RELEASE-p2 UNAME_r=14.3-RELEASE-p2 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.4 MASTERMNT=/mnt/data/.m/143amd64-deluxe-desktop/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=screen GID=0 OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 UID=0 PWD=/mnt/data/.m/143amd64-deluxe-desktop/03/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=143amd64-deluxe-desktop SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/mnt/data/.m/143amd64-deluxe-desktop/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.4 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/math/py-openTSNE/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/py-openTSNE/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/math/py-openTSNE/work-py311/.cache HOME=/wrkdirs/usr/ports/math/py-openTSNE/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/py-openTSNE/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/py-openTSNE/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/math/py-openTSNE/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/py-openTSNE/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/math/py-openTSNE/work-py311/.cache HOME=/wrkdirs/usr/ports/math/py-openTSNE/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/py-openTSNE/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/py-openTSNE/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=14.3 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/openTSNE" EXAMPLESDIR="share/examples/openTSNE" DATADIR="share/openTSNE" WWWDIR="www/openTSNE" ETCDIR="etc/openTSNE" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/openTSNE DOCSDIR=/usr/local/share/doc/openTSNE EXAMPLESDIR=/usr/local/share/examples/openTSNE WWWDIR=/usr/local/www/openTSNE ETCDIR=/usr/local/etc/openTSNE --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # Work around some weirdness when fetching golang modules GO_TAGS+=netcgo .if ${.CURDIR:M*/www/chromium*} MAKE_JOBS_NUMBER=24 .endif .if ${.CURDIR:M*/www/ungoogled-chromium*} MAKE_JOBS_NUMBER=24 .endif .if ${.CURDIR:M*/lang/rust*} MAKE_JOBS_NUMBER=10 .endif .if ${.CURDIR:M*/lang/gcc*} MAKE_JOBS_NUMBER=10 .endif .if ${.CURDIR:M*/www/iridium*} MAKE_JOBS_NUMBER=16 .endif .if ${.CURDIR:M*/devel/electron*} MAKE_JOBS_NUMBER=20 .endif .if ${.CURDIR:M*/databases/mongodb*} MAKE_JOBS_NUMBER=12 .endif .if ${.CURDIR:M*/devel/llvm*} MAKE_JOBS_NUMBER=16 .endif # Speed things up a bit MAKE_JOBS_NUMBER?=8 #### #### #MAKE_JOBS_NUMBER?=4 # Alows us to build ports non-interactivly DISABLE_LICENSES=yes LICENSES_ACCEPTED+= DCC # Enable SNDIO on anything that supports it #OPTIONS_SET+=PULSEAUDIO OPTIONS_SET+=SNDIO # Yes we have MS Windows x11-fonts_webfonts_SET+=EXTRAFONTS CLEARTYPE # Desktop Specific Options sysutils_gksu_UNSET+=NAUTILUS x11-wm_compiz-fusion_UNSET+=EMERALD accessibility_redshift_SET+=GUI VIDMODE # These ports default to other audio servers, audio_espeak_UNSET+=PORTAUDIO www_qt5-webengine_UNSET+=ALSA www_qt6-webengine_UNSET+=ALSA audio_rhvoice_UNSET+=AO comms_morse_UNSET+=OSS audio_harp_UNSET+=OSS # Somehow these options are being set and result in ports being rebuilt needlessly becuase they are actually turned off audio_alsa-plugins_SET+=FFMPEG JACK PULSEAUDIO SAMPLERATE SPEEX #### Misc Poudriere #### .include "/etc/make.conf.ports_env" ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-openTSNE-1.0.2 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.5.1.pkg [143amd64-deluxe-desktop-job-03] Installing pkg-2.5.1... [143amd64-deluxe-desktop-job-03] Extracting pkg-2.5.1: .......... done ===> py311-openTSNE-1.0.2 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-openTSNE-1.0.2 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-openTSNE-1.0.2 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-openTSNE-1.0.2 for building => SHA256 Checksum OK for opentsne-1.0.2.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Fetching all distfiles required by py311-openTSNE-1.0.2 for building ===> Extracting for py311-openTSNE-1.0.2 => SHA256 Checksum OK for opentsne-1.0.2.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Patching for py311-openTSNE-1.0.2 ===> Applying FreeBSD patches for py311-openTSNE-1.0.2 from /usr/ports/math/py-openTSNE/files =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-openTSNE-1.0.2 depends on package: py311-setuptools>0 - not found ===> Installing existing package /packages/All/py311-setuptools-63.1.0_3.pkg [143amd64-deluxe-desktop-job-03] Installing py311-setuptools-63.1.0_3... [143amd64-deluxe-desktop-job-03] `-- Installing python311-3.11.14... [143amd64-deluxe-desktop-job-03] | `-- Installing gettext-runtime-0.26... [143amd64-deluxe-desktop-job-03] | | `-- Installing indexinfo-0.3.1_1... [143amd64-deluxe-desktop-job-03] | | `-- Extracting indexinfo-0.3.1_1: . done [143amd64-deluxe-desktop-job-03] | `-- Extracting gettext-runtime-0.26: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing libffi-3.5.1... [143amd64-deluxe-desktop-job-03] | `-- Extracting libffi-3.5.1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing mpdecimal-4.0.1... [143amd64-deluxe-desktop-job-03] | `-- Extracting mpdecimal-4.0.1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing readline-8.3.1... [143amd64-deluxe-desktop-job-03] | `-- Extracting readline-8.3.1: .......... done [143amd64-deluxe-desktop-job-03] `-- Extracting python311-3.11.14: .......... done [143amd64-deluxe-desktop-job-03] Extracting py311-setuptools-63.1.0_3: .......... done ===== Message from python311-3.11.14: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-openTSNE-1.0.2 depends on package: py311-setuptools>0 - found ===> Returning to build of py311-openTSNE-1.0.2 ===> py311-openTSNE-1.0.2 depends on package: py311-numpy>=1.16,1<1.27,1 - not found ===> Installing existing package /packages/All/py311-numpy-1.26.4_11,1.pkg [143amd64-deluxe-desktop-job-03] Installing py311-numpy-1.26.4_11,1... [143amd64-deluxe-desktop-job-03] `-- Installing gcc14-14.2.0_4... [143amd64-deluxe-desktop-job-03] | `-- Installing binutils-2.44,1... [143amd64-deluxe-desktop-job-03] | | `-- Installing zstd-1.5.7_1... [143amd64-deluxe-desktop-job-03] | | `-- Extracting zstd-1.5.7_1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Extracting binutils-2.44,1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing gmp-6.3.0... [143amd64-deluxe-desktop-job-03] | `-- Extracting gmp-6.3.0: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing mpc-1.3.1_1... [143amd64-deluxe-desktop-job-03] | | `-- Installing mpfr-4.2.2,1... [143amd64-deluxe-desktop-job-03] | | `-- Extracting mpfr-4.2.2,1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Extracting mpc-1.3.1_1: ...... done [143amd64-deluxe-desktop-job-03] `-- Extracting gcc14-14.2.0_4: .......... done [143amd64-deluxe-desktop-job-03] `-- Installing openblas-0.3.30,2... [143amd64-deluxe-desktop-job-03] `-- Extracting openblas-0.3.30,2: .......... done [143amd64-deluxe-desktop-job-03] `-- Installing suitesparse-umfpack-6.3.7... [143amd64-deluxe-desktop-job-03] | `-- Installing suitesparse-amd-3.3.4... [143amd64-deluxe-desktop-job-03] | | `-- Installing suitesparse-config-7.12.1... [143amd64-deluxe-desktop-job-03] | | `-- Extracting suitesparse-config-7.12.1: .......... done [143amd64-deluxe-desktop-job-03] | `-- Extracting suitesparse-amd-3.3.4: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing suitesparse-camd-3.3.5... [143amd64-deluxe-desktop-job-03] | `-- Extracting suitesparse-camd-3.3.5: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing suitesparse-ccolamd-3.3.5... [143amd64-deluxe-desktop-job-03] | `-- Extracting suitesparse-ccolamd-3.3.5: .......... done [143amd64-deluxe-desktop-job-03] | `-- Installing suitesparse-cholmod-5.3.4... [143amd64-deluxe-desktop-job-03] | | `-- Installing suitesparse-colamd-3.3.5... [143amd64-deluxe-desktop-job-03] | | `-- Extracting suitesparse-colamd-3.3.5: .......... done [143amd64-deluxe-desktop-job-03] | `-- Extracting suitesparse-cholmod-5.3.4: .......... done [143amd64-deluxe-desktop-job-03] `-- Extracting suitesparse-umfpack-6.3.7: .......... done [143amd64-deluxe-desktop-job-03] Extracting py311-numpy-1.26.4_11,1: .......... done ===== Message from gcc14-14.2.0_4: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc14 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> py311-openTSNE-1.0.2 depends on package: py311-numpy>=1.16,1<1.27,1 - found ===> Returning to build of py311-openTSNE-1.0.2 ===> py311-openTSNE-1.0.2 depends on package: py311-wheel>0 - not found ===> Installing existing package /packages/All/py311-wheel-0.45.1.pkg [143amd64-deluxe-desktop-job-03] Installing py311-wheel-0.45.1... [143amd64-deluxe-desktop-job-03] Extracting py311-wheel-0.45.1: .......... done ===> py311-openTSNE-1.0.2 depends on package: py311-wheel>0 - found ===> Returning to build of py311-openTSNE-1.0.2 ===> py311-openTSNE-1.0.2 depends on package: py311-cython>=0.29.37<3 - not found ===> Installing existing package /packages/All/py311-cython-0.29.37_2.pkg [143amd64-deluxe-desktop-job-03] Installing py311-cython-0.29.37_2... [143amd64-deluxe-desktop-job-03] Extracting py311-cython-0.29.37_2: .......... done ===> py311-openTSNE-1.0.2 depends on package: py311-cython>=0.29.37<3 - found ===> Returning to build of py311-openTSNE-1.0.2 ===> py311-openTSNE-1.0.2 depends on file: /usr/local/bin/python3.11 - found ===> py311-openTSNE-1.0.2 depends on package: py311-build>=0 - not found ===> Installing existing package /packages/All/py311-build-1.3.0.pkg [143amd64-deluxe-desktop-job-03] Installing py311-build-1.3.0... [143amd64-deluxe-desktop-job-03] `-- Installing py311-packaging-25.0... [143amd64-deluxe-desktop-job-03] `-- Extracting py311-packaging-25.0: .......... done [143amd64-deluxe-desktop-job-03] `-- Installing py311-pyproject-hooks-1.2.0... [143amd64-deluxe-desktop-job-03] `-- Extracting py311-pyproject-hooks-1.2.0: .......... done [143amd64-deluxe-desktop-job-03] Extracting py311-build-1.3.0: .......... done ===> py311-openTSNE-1.0.2 depends on package: py311-build>=0 - found ===> Returning to build of py311-openTSNE-1.0.2 ===> py311-openTSNE-1.0.2 depends on package: py311-installer>=0 - not found ===> Installing existing package /packages/All/py311-installer-0.7.0.pkg [143amd64-deluxe-desktop-job-03] Installing py311-installer-0.7.0... [143amd64-deluxe-desktop-job-03] Extracting py311-installer-0.7.0: .......... done ===> py311-openTSNE-1.0.2 depends on package: py311-installer>=0 - found ===> Returning to build of py311-openTSNE-1.0.2 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-openTSNE-1.0.2 depends on shared library: libfftw3.so - not found ===> Installing existing package /packages/All/fftw3-3.3.10_5.pkg [143amd64-deluxe-desktop-job-03] Installing fftw3-3.3.10_5... [143amd64-deluxe-desktop-job-03] Extracting fftw3-3.3.10_5: .......... done ===> py311-openTSNE-1.0.2 depends on shared library: libfftw3.so - found (/usr/local/lib/libfftw3.so) ===> Returning to build of py311-openTSNE-1.0.2 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Configuring for py311-openTSNE-1.0.2 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Building for py311-openTSNE-1.0.2 * Getting build dependencies for wheel... FFTW3 header files found. Using FFTW implementation of FFT. running egg_info writing openTSNE.egg-info/PKG-INFO writing dependency_links to openTSNE.egg-info/dependency_links.txt writing requirements to openTSNE.egg-info/requires.txt writing top-level names to openTSNE.egg-info/top_level.txt warning: openTSNE/_matrix_mul/matrix_mul_fftw3.pyx:9:7: implicit declaration of 'np' warning: openTSNE/_tsne.pyx:9:7: implicit declaration of 'np' warning: openTSNE/_tsne.pyx:104:6: implicit declaration of 'dest_sig' warning: openTSNE/_tsne.pyx:104:6: implicit declaration of 'arg' warning: openTSNE/_tsne.pyx:104:6: implicit declaration of 'dtype' warning: openTSNE/_tsne.pyx:104:6: implicit declaration of 'arg_base' warning: openTSNE/_tsne.pyx:104:6: implicit declaration of 'candidates' warning: openTSNE/_tsne.pyx:104:6: implicit declaration of 'sig' warning: openTSNE/_tsne.pyx:104:6: implicit declaration of 'match_found' warning: openTSNE/_tsne.pyx:104:6: implicit declaration of 'src_sig' warning: openTSNE/_tsne.pyx:104:6: implicit declaration of 'dst_type' warning: openTSNE/_tsne.pyx:540:8: implicit declaration of 'coord_max' warning: openTSNE/_tsne.pyx:542:8: implicit declaration of 'coord_min' warning: openTSNE/kl_divergence.pyx:9:7: implicit declaration of 'np' warning: openTSNE/kl_divergence.pyx:17:19: implicit declaration of 'estimate_positive_gradient_nn' warning: openTSNE/quad_tree.pyx:166:24: Not all members given for struct 'Node' warning: openTSNE/quad_tree.pyx:166:24: Not all members given for struct 'Node' Compiling openTSNE/quad_tree.pyx because it changed. Compiling openTSNE/_tsne.pyx because it changed. Compiling openTSNE/kl_divergence.pyx because it changed. Compiling openTSNE/_matrix_mul/matrix_mul_fftw3.pyx because it changed. [1/4] Cythonizing openTSNE/_matrix_mul/matrix_mul_fftw3.pyx [2/4] Cythonizing openTSNE/_tsne.pyx [3/4] Cythonizing openTSNE/kl_divergence.pyx [4/4] Cythonizing openTSNE/quad_tree.pyx reading manifest file 'openTSNE.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.c' under directory 'openTSNE/' adding license file 'LICENSE' writing manifest file 'openTSNE.egg-info/SOURCES.txt' * Building wheel... FFTW3 header files found. Using FFTW implementation of FFT. running bdist_wheel running build running build_py creating build creating build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311 creating build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE copying openTSNE/tsne.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE copying openTSNE/__init__.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE copying openTSNE/version.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE copying openTSNE/initialization.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE copying openTSNE/affinity.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE copying openTSNE/utils.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE copying openTSNE/callbacks.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE copying openTSNE/sklearn.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE copying openTSNE/nearest_neighbors.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE copying openTSNE/metrics.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE creating build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_matrix_mul copying openTSNE/_matrix_mul/__init__.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_matrix_mul creating build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies copying openTSNE/dependencies/__init__.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies creating build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies/annoy copying openTSNE/dependencies/annoy/__init__.py -> build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies/annoy running build_ext cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/Library/include -c ./tmpinqo85c5/omp.c -o ./tmpinqo85c5/omp.o Found openmp. Compiling with openmp flags... building 'openTSNE.quad_tree' extension creating build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311 creating build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/Library/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c openTSNE/quad_tree.cpp -o build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/quad_tree.o -O3 -ffast-math -fno-finite-math-only -fno-associative-math -fopenmp In file included from openTSNE/quad_tree.cpp:780: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ openTSNE/quad_tree.cpp:22004:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 22004 | CYTHON_FALLTHROUGH; | ^ openTSNE/quad_tree.cpp:350:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 350 | #define CYTHON_FALLTHROUGH [[fallthrough]] | ^ openTSNE/quad_tree.cpp:22015:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 22015 | CYTHON_FALLTHROUGH; | ^ openTSNE/quad_tree.cpp:350:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 350 | #define CYTHON_FALLTHROUGH [[fallthrough]] | ^ 3 warnings generated. c++ -shared -L/usr/local/lib -L/usr/local/lib -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/quad_tree.o -L/usr/local/lib -L/usr/local/Library/lib -L/usr/local/lib -o build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/quad_tree.cpython-311.so -fopenmp building 'openTSNE._tsne' extension cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/Library/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c openTSNE/_tsne.cpp -o build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_tsne.o -O3 -ffast-math -fno-finite-math-only -fno-associative-math -fopenmp In file included from openTSNE/_tsne.cpp:780: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ openTSNE/_tsne.cpp:3682:23: warning: code will never be executed [-Wunreachable-code] 3682 | if ((1 == 0)) abort(); | ^~~~~ openTSNE/_tsne.cpp:3682:14: note: silence by adding parentheses to mark code as explicitly dead 3682 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) openTSNE/_tsne.cpp:5168:31: warning: code will never be executed [-Wunreachable-code] 5168 | if ((1 == 0)) abort(); | ^~~~~ openTSNE/_tsne.cpp:5168:22: note: silence by adding parentheses to mark code as explicitly dead 5168 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) openTSNE/_tsne.cpp:6000:31: warning: code will never be executed [-Wunreachable-code] 6000 | if ((1 == 0)) abort(); | ^~~~~ openTSNE/_tsne.cpp:6000:22: note: silence by adding parentheses to mark code as explicitly dead 6000 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) openTSNE/_tsne.cpp:6739:23: warning: code will never be executed [-Wunreachable-code] 6739 | if ((1 == 0)) abort(); | ^~~~~ openTSNE/_tsne.cpp:6739:14: note: silence by adding parentheses to mark code as explicitly dead 6739 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) openTSNE/_tsne.cpp:37249:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 37249 | CYTHON_FALLTHROUGH; | ^ openTSNE/_tsne.cpp:350:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 350 | #define CYTHON_FALLTHROUGH [[fallthrough]] | ^ openTSNE/_tsne.cpp:37260:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 37260 | CYTHON_FALLTHROUGH; | ^ openTSNE/_tsne.cpp:350:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 350 | #define CYTHON_FALLTHROUGH [[fallthrough]] | ^ 7 warnings generated. c++ -shared -L/usr/local/lib -L/usr/local/lib -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_tsne.o -L/usr/local/lib -L/usr/local/Library/lib -L/usr/local/lib -o build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_tsne.cpython-311.so -fopenmp building 'openTSNE.kl_divergence' extension cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/Library/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c openTSNE/kl_divergence.cpp -o build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/kl_divergence.o -O3 -ffast-math -fno-finite-math-only -fno-associative-math -fopenmp In file included from openTSNE/kl_divergence.cpp:780: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ openTSNE/kl_divergence.cpp:20655:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 20655 | CYTHON_FALLTHROUGH; | ^ openTSNE/kl_divergence.cpp:350:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 350 | #define CYTHON_FALLTHROUGH [[fallthrough]] | ^ openTSNE/kl_divergence.cpp:20666:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 20666 | CYTHON_FALLTHROUGH; | ^ openTSNE/kl_divergence.cpp:350:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 350 | #define CYTHON_FALLTHROUGH [[fallthrough]] | ^ openTSNE/kl_divergence.cpp:22388:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 22388 | CYTHON_FALLTHROUGH; | ^ openTSNE/kl_divergence.cpp:350:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 350 | #define CYTHON_FALLTHROUGH [[fallthrough]] | ^ openTSNE/kl_divergence.cpp:22399:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 22399 | CYTHON_FALLTHROUGH; | ^ openTSNE/kl_divergence.cpp:350:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 350 | #define CYTHON_FALLTHROUGH [[fallthrough]] | ^ 5 warnings generated. c++ -shared -L/usr/local/lib -L/usr/local/lib -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/kl_divergence.o -L/usr/local/lib -L/usr/local/Library/lib -L/usr/local/lib -o build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/kl_divergence.cpython-311.so -fopenmp building 'openTSNE.dependencies.annoy.annoylib' extension creating build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies creating build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies/annoy cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/Library/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c openTSNE/dependencies/annoy/annoymodule.cc -o build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies/annoy/annoymodule.o -std=c++14 -DANNOYLIB_MULTITHREADED_BUILD -O3 -ffast-math -fno-finite-math-only -fno-associative-math -fopenmp c++ -shared -L/usr/local/lib -L/usr/local/lib -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies/annoy/annoymodule.o -L/usr/local/lib -L/usr/local/Library/lib -L/usr/local/lib -o build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies/annoy/annoylib.cpython-311.so -fopenmp building 'openTSNE._matrix_mul.matrix_mul' extension creating build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_matrix_mul cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/Library/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c openTSNE/_matrix_mul/matrix_mul_fftw3.cpp -o build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_matrix_mul/matrix_mul_fftw3.o -O3 -ffast-math -fno-finite-math-only -fno-associative-math -fopenmp In file included from openTSNE/_matrix_mul/matrix_mul_fftw3.cpp:783: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ openTSNE/_matrix_mul/matrix_mul_fftw3.cpp:21075:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 21075 | CYTHON_FALLTHROUGH; | ^ openTSNE/_matrix_mul/matrix_mul_fftw3.cpp:353:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 353 | #define CYTHON_FALLTHROUGH [[fallthrough]] | ^ openTSNE/_matrix_mul/matrix_mul_fftw3.cpp:21086:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 21086 | CYTHON_FALLTHROUGH; | ^ openTSNE/_matrix_mul/matrix_mul_fftw3.cpp:353:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 353 | #define CYTHON_FALLTHROUGH [[fallthrough]] | ^ 3 warnings generated. c++ -shared -L/usr/local/lib -L/usr/local/lib -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_matrix_mul/matrix_mul_fftw3.o -L/usr/local/lib -L/usr/local/Library/lib -L/usr/local/lib -lfftw3 -o build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_matrix_mul/matrix_mul.cpython-311.so -fopenmp installing to build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel running install running install_lib creating build/bdist.freebsd-14.3-RELEASE-p2-amd64 creating build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel creating build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/tsne.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/__init__.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_tsne.cpython-311.so -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/version.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/quad_tree.cpython-311.so -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE creating build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE/_matrix_mul copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_matrix_mul/__init__.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE/_matrix_mul copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/_matrix_mul/matrix_mul.cpython-311.so -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE/_matrix_mul copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/initialization.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/affinity.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/utils.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/kl_divergence.cpython-311.so -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/callbacks.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/sklearn.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE creating build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE/dependencies creating build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE/dependencies/annoy copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies/annoy/__init__.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE/dependencies/annoy copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies/annoy/annoylib.cpython-311.so -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE/dependencies/annoy copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/dependencies/__init__.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE/dependencies copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/nearest_neighbors.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE copying build/lib.freebsd-14.3-RELEASE-p2-amd64-cpython-311/openTSNE/metrics.py -> build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE running install_egg_info running egg_info writing openTSNE.egg-info/PKG-INFO writing dependency_links to openTSNE.egg-info/dependency_links.txt writing requirements to openTSNE.egg-info/requires.txt writing top-level names to openTSNE.egg-info/top_level.txt reading manifest file 'openTSNE.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.c' under directory 'openTSNE/' adding license file 'LICENSE' writing manifest file 'openTSNE.egg-info/SOURCES.txt' Copying openTSNE.egg-info to build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE-1.0.2-py3.11.egg-info running install_scripts creating build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel/openTSNE-1.0.2.dist-info/WHEEL creating '/wrkdirs/usr/ports/math/py-openTSNE/work-py311/opentsne-1.0.2/dist/tmpmws3ngb9/openTSNE-1.0.2-cp311-cp311-freebsd_14_3_release_p2_amd64.whl' and adding 'build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel' to it adding 'openTSNE/__init__.py' adding 'openTSNE/_tsne.cpython-311.so' adding 'openTSNE/affinity.py' adding 'openTSNE/callbacks.py' adding 'openTSNE/initialization.py' adding 'openTSNE/kl_divergence.cpython-311.so' adding 'openTSNE/metrics.py' adding 'openTSNE/nearest_neighbors.py' adding 'openTSNE/quad_tree.cpython-311.so' adding 'openTSNE/sklearn.py' adding 'openTSNE/tsne.py' adding 'openTSNE/utils.py' adding 'openTSNE/version.py' adding 'openTSNE/_matrix_mul/__init__.py' adding 'openTSNE/_matrix_mul/matrix_mul.cpython-311.so' adding 'openTSNE/dependencies/__init__.py' adding 'openTSNE/dependencies/annoy/__init__.py' adding 'openTSNE/dependencies/annoy/annoylib.cpython-311.so' adding 'openTSNE-1.0.2.dist-info/LICENSE' adding 'openTSNE-1.0.2.dist-info/METADATA' adding 'openTSNE-1.0.2.dist-info/WHEEL' adding 'openTSNE-1.0.2.dist-info/top_level.txt' adding 'openTSNE-1.0.2.dist-info/RECORD' removing build/bdist.freebsd-14.3-RELEASE-p2-amd64/wheel Successfully built openTSNE-1.0.2-cp311-cp311-freebsd_14_3_release_p2_amd64.whl =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-openTSNE-1.0.2 depends on package: py311-numpy>=1.16,1<1.27,1 - found ===> py311-openTSNE-1.0.2 depends on package: py311-scipy>0 - not found ===> Installing existing package /packages/All/py311-scipy-1.11.1_4,1.pkg [143amd64-deluxe-desktop-job-03] Installing py311-scipy-1.11.1_4,1... [143amd64-deluxe-desktop-job-03] `-- Installing blas-3.12.1... [143amd64-deluxe-desktop-job-03] `-- Extracting blas-3.12.1: ..... done [143amd64-deluxe-desktop-job-03] Extracting py311-scipy-1.11.1_4,1: .......... done ===> py311-openTSNE-1.0.2 depends on package: py311-scipy>0 - found ===> Returning to build of py311-openTSNE-1.0.2 ===> py311-openTSNE-1.0.2 depends on package: py311-scikit-learn>=0.20 - not found ===> Installing existing package /packages/All/py311-scikit-learn-1.7.2.pkg [143amd64-deluxe-desktop-job-03] Installing py311-scikit-learn-1.7.2... [143amd64-deluxe-desktop-job-03] `-- Installing py311-joblib-1.5.1... [143amd64-deluxe-desktop-job-03] `-- Extracting py311-joblib-1.5.1: .......... done [143amd64-deluxe-desktop-job-03] `-- Installing py311-threadpoolctl-3.6.0... [143amd64-deluxe-desktop-job-03] `-- Extracting py311-threadpoolctl-3.6.0: ....... done [143amd64-deluxe-desktop-job-03] Extracting py311-scikit-learn-1.7.2: .......... done ===> py311-openTSNE-1.0.2 depends on package: py311-scikit-learn>=0.20 - found ===> Returning to build of py311-openTSNE-1.0.2 ===> py311-openTSNE-1.0.2 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Staging for py311-openTSNE-1.0.2 ===> Generating temporary packing list ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2025-12-29T17:52:36+0000' 'PKG_NOTE_ports_top_git_hash=3dd9e2202282' 'PKG_NOTE_ports_top_checkout_unclean=yes' 'PKG_NOTE_port_git_hash=dae8e4a0fc33' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.4' NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Building packages for py311-openTSNE-1.0.2 ===> Building py311-openTSNE-1.0.2 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for py311-openTSNE-1.0.2 build of math/py-openTSNE@py311 | py311-openTSNE-1.0.2 ended at Mon Dec 29 12:53:30 EST 2025 build time: 00:00:55